Computer software | Department of Biophysics and Cell Biology

Free online calculators from Scientific Volume Imaging:

• Microscopy Nyquist rate and PSF calculator
• Backprojected confocal pinhole calculator
• Image size to file size calculator

Computer software developed at the Department of Biophysics and Cell Biology:

AccPbFRET

Acceptor Photobleaching FRET evaluation for microscopy

ClickOnGold

Determining the coordinates of immunogold beads from transmission electron microscope(TEM) images.

FRETcalc
Excel spreadsheet for calculating FRET efficiency from ensemble data (medians or trimmed means of cell or pixel populations), with pre-loaded spectral data for the most commong FRET fluorophores

ReFLEX
FRET evaluation for flow cytometry

RiFRET
Intensity-based Ratiometric FRET evaluation for microscopy